An interactive environment for agile analysis and visualization of ChIP-sequencing data.

Basepair is able to scale from a single sample to thousands with the help of parallel processing. No coding required. Choose from ready-to-use ChIP-Seq analysis pipelines, hit Run, and get publication …

Process and analyze ATAC-Seq/ChIP-Seq data easily in a user-friendly, context-sensitive interface to uncover alterations in chromatin accessibility and gene regulation across the genome.

Learn how to choose from several different peak detection methods, select binding proteins and evaluate gene ontology in our ChIP-Seq analysis workflow!

Oct 9, 2025 · H 3 NGST is a fully automated, web-based platform designed to streamline the analysis of ChIP-seq data from raw data acquisition to peak annotation and visualization.

Easy and flexible bioinformatics software for ChIP-seq and ATAC-seq data analysis.

Mar 15, 2025 · This tutorial introduces beginners to the fascinating world of ChIP-seq data analysis using HOMER, a versatile software suite that has become a mainstay in genomic research.

In addition to implementing previously published ChIP-microarray (ChIP-chip) analysis methods, the software contains statistical methods designed specifically for ChlP sequencing (ChIP-seq) data …

EaSeq is free for all scientists and without any restrictions on use. It is made for Windows, and it therefore requires a virtual machine to run on Mac OS or Linux. We have tested it succesfully using …

The ChIP-Seq Web Server provides access to a set of useful tools performing common ChIP-seq data analysis tasks, including positional correlation analysis, peak detection, and genome partitioning into …